Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS11Q9H270 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS11Q9H270 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS11Q9H270 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VPS11Q9H270 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
VPS11Q9H270 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS11Q9H270 KRT18P67-201ENST00000432816 1264 ntBASIC16.23■□□□□ 0.19
VPS11Q9H270 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VPS11Q9H270 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS11Q9H270 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS11Q9H270 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS11Q9H270 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.23■□□□□ 0.19
VPS11Q9H270 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 AL121912.1-201ENST00000603683 238 ntBASIC16.23■□□□□ 0.19
VPS11Q9H270 AC148477.8-201ENST00000624298 468 ntBASIC16.23■□□□□ 0.19
VPS11Q9H270 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS11Q9H270 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS11Q9H270 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS11Q9H270 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VPS11Q9H270 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS11Q9H270 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VPS11Q9H270 AC138035.3-201ENST00000622706 2791 ntBASIC16.22■□□□□ 0.19
VPS11Q9H270 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
VPS11Q9H270 PMS2P4-201ENST00000412466 1052 ntBASIC16.22■□□□□ 0.19
VPS11Q9H270 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.22■□□□□ 0.19
VPS11Q9H270 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.22■□□□□ 0.19
VPS11Q9H270 AC092910.1-201ENST00000482027 1129 ntBASIC16.22■□□□□ 0.19
VPS11Q9H270 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS11Q9H270 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS11Q9H270 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS11Q9H270 AL031432.2-201ENST00000566714 459 ntBASIC16.22■□□□□ 0.19
VPS11Q9H270 AL928711.1-201ENST00000570165 459 ntBASIC16.22■□□□□ 0.19
VPS11Q9H270 AL645728.2-201ENST00000641974 660 ntBASIC16.22■□□□□ 0.19
VPS11Q9H270 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
VPS11Q9H270 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VPS11Q9H270 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 AC087481.3-201ENST00000602886 1894 ntBASIC16.22■□□□□ 0.19
VPS11Q9H270 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS11Q9H270 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS11Q9H270 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms