Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2J3Q9H1A7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 AC011477.6-201ENST00000604980 1927 ntBASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 IGHV3-22-201ENST00000520721 359 ntBASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 AC104692.2-201ENST00000603054 253 ntBASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 AC116407.3-201ENST00000623905 1129 ntBASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 AC010507.1-201ENST00000633895 436 ntBASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 SSR4P1-203ENST00000599569 2260 ntBASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR2J3Q9H1A7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 AP001005.1-201ENST00000571755 1248 ntBASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 AC023157.3-201ENST00000619086 2088 ntBASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.91□□□□□ -0.02
POLR2J3Q9H1A7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
POLR2J3Q9H1A7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms