Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 ELK2AP-201ENST00000392510 1007 ntBASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 CALR4P-201ENST00000431943 946 ntBASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 RPSAP36-202ENST00000494591 1261 ntBASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 GAPDHP40-201ENST00000505218 1006 ntBASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 AC079316.1-201ENST00000548397 411 ntBASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-1Q9BYQ7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 AC018695.7-201ENST00000624587 2492 ntBASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 ACKR1-201ENST00000368121 1240 ntBASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 MIR1202-201ENST00000408529 83 ntBASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 SLC25A24P2-201ENST00000415059 510 ntBASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 KRT18P43-201ENST00000469825 1281 ntBASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC8.19□□□□□ -1.1
KRTAP4-1Q9BYQ7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms