Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 AC139749.1-202ENST00000617529 3139 ntBASIC15.71■□□□□ 0.11
EBF4Q9BQW3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
EBF4Q9BQW3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
EBF4Q9BQW3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
EBF4Q9BQW3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 AC007191.1-201ENST00000623179 2995 ntBASIC15.7■□□□□ 0.1
EBF4Q9BQW3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 AC005089.1-201ENST00000619486 2241 ntBASIC15.7■□□□□ 0.1
EBF4Q9BQW3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 OR7E47P-204ENST00000575924 449 ntBASIC15.7■□□□□ 0.1
EBF4Q9BQW3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 MIR4515-201ENST00000584082 81 ntBASIC15.7■□□□□ 0.1
EBF4Q9BQW3 ACTL9-202ENST00000612068 1252 ntBASIC15.7■□□□□ 0.1
EBF4Q9BQW3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 LINC00528-201ENST00000600723 2160 ntBASIC15.7■□□□□ 0.1
EBF4Q9BQW3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.7■□□□□ 0.1
EBF4Q9BQW3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
EBF4Q9BQW3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 AC245100.5-201ENST00000452108 331 ntBASIC15.69■□□□□ 0.1
EBF4Q9BQW3 IGHV3-65-201ENST00000523210 341 ntBASIC15.69■□□□□ 0.1
EBF4Q9BQW3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 AL358472.4-201ENST00000633140 710 ntBASIC15.69■□□□□ 0.1
EBF4Q9BQW3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
EBF4Q9BQW3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
EBF4Q9BQW3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms