Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 GGT3P-204ENST00000453783 1664 ntBASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 RPS8P6-201ENST00000426177 609 ntBASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 AC074386.1-202ENST00000463561 864 ntBASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 C20orf181-201ENST00000623918 480 ntBASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 AC134684.3-201ENST00000641758 218 ntBASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 AL109954.1-202ENST00000564051 2148 ntBASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 LINC01101-201ENST00000622953 1884 ntBASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1CQ9BQE3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 HTR5BP-201ENST00000430851 1154 ntBASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 AC004967.1-201ENST00000453589 447 ntBASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 AC107918.2-201ENST00000530817 355 ntBASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 CICP24-201ENST00000605464 2705 ntBASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1CQ9BQE3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms