Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC10.92□□□□□ -0.66
LYSTQ99698 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 KRTAP10-13P-201ENST00000412914 571 ntBASIC10.92□□□□□ -0.66
LYSTQ99698 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC10.92□□□□□ -0.66
LYSTQ99698 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LYSTQ99698 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.92□□□□□ -0.66
LYSTQ99698 AP001063.1-201ENST00000568332 529 ntBASIC10.92□□□□□ -0.66
LYSTQ99698 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC10.92□□□□□ -0.66
LYSTQ99698 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LYSTQ99698 HLA-C-210ENST00000640219 976 ntBASIC10.92□□□□□ -0.66
LYSTQ99698 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 REXO1L1P-202ENST00000608646 1974 ntBASIC10.92□□□□□ -0.66
LYSTQ99698 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC10.92□□□□□ -0.66
LYSTQ99698 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LYSTQ99698 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.92□□□□□ -0.66
LYSTQ99698 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC10.92□□□□□ -0.66
LYSTQ99698 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC10.92□□□□□ -0.66
LYSTQ99698 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC10.92□□□□□ -0.66
LYSTQ99698 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC10.92□□□□□ -0.66
LYSTQ99698 LY6E-208ENST00000520531 490 ntTSL 2 BASIC10.92□□□□□ -0.66
LYSTQ99698 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC10.92□□□□□ -0.66
LYSTQ99698 EEF1DP1-201ENST00000585891 896 ntBASIC10.92□□□□□ -0.66
LYSTQ99698 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC10.92□□□□□ -0.66
LYSTQ99698 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LYSTQ99698 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LYSTQ99698 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LYSTQ99698 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC10.91□□□□□ -0.66
LYSTQ99698 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.91□□□□□ -0.66
LYSTQ99698 MIR4750-201ENST00000584564 56 ntBASIC10.91□□□□□ -0.66
LYSTQ99698 CDK7-214ENST00000626796 358 ntTSL 5 BASIC10.91□□□□□ -0.66
LYSTQ99698 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC10.91□□□□□ -0.66
LYSTQ99698 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC10.91□□□□□ -0.66
LYSTQ99698 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LYSTQ99698 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 LETM1P2-201ENST00000597330 2178 ntBASIC10.91□□□□□ -0.66
LYSTQ99698 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LYSTQ99698 AMT-233ENST00000636522 1620 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10.91□□□□□ -0.66
LYSTQ99698 NUP210P1-202ENST00000504322 710 ntBASIC10.91□□□□□ -0.66
LYSTQ99698 CTBP2P4-201ENST00000513884 920 ntBASIC10.91□□□□□ -0.66
LYSTQ99698 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 AC134407.2-201ENST00000625089 1978 ntBASIC10.91□□□□□ -0.66
LYSTQ99698 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC10.91□□□□□ -0.66
LYSTQ99698 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.91□□□□□ -0.66
LYSTQ99698 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC10.91□□□□□ -0.66
LYSTQ99698 AC141586.1-203ENST00000567242 366 ntBASIC10.91□□□□□ -0.66
LYSTQ99698 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC10.91□□□□□ -0.66
LYSTQ99698 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LYSTQ99698 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC10.91□□□□□ -0.66
LYSTQ99698 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.91□□□□□ -0.66
LYSTQ99698 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LYSTQ99698 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms