Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC097359.3-201ENST00000603982 1210 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.52■□□□□ 0.24
CDCA3Q99618 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.52■□□□□ 0.24
CDCA3Q99618 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.52■□□□□ 0.24
CDCA3Q99618 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.52■□□□□ 0.24
CDCA3Q99618 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.52■□□□□ 0.24
CDCA3Q99618 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CDCA3Q99618 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CDCA3Q99618 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA3Q99618 AC138028.6-201ENST00000616106 1482 ntBASIC16.52■□□□□ 0.23
CDCA3Q99618 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.52■□□□□ 0.23
CDCA3Q99618 AC009053.2-201ENST00000563701 2365 ntBASIC16.52■□□□□ 0.23
CDCA3Q99618 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA3Q99618 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CDCA3Q99618 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA3Q99618 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA3Q99618 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDCA3Q99618 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA3Q99618 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA3Q99618 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDCA3Q99618 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA3Q99618 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA3Q99618 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA3Q99618 AC068880.1-201ENST00000507289 2297 ntBASIC16.51■□□□□ 0.23
CDCA3Q99618 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA3Q99618 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA3Q99618 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDCA3Q99618 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA3Q99618 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 AC007969.1-201ENST00000433675 447 ntBASIC16.51■□□□□ 0.23
CDCA3Q99618 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.51■□□□□ 0.23
CDCA3Q99618 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDCA3Q99618 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.51■□□□□ 0.23
CDCA3Q99618 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
CDCA3Q99618 AC078819.1-201ENST00000547454 765 ntBASIC16.51■□□□□ 0.23
CDCA3Q99618 AC012085.1-201ENST00000548270 765 ntBASIC16.51■□□□□ 0.23
CDCA3Q99618 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA3Q99618 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA3Q99618 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDCA3Q99618 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDCA3Q99618 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA3Q99618 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA3Q99618 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDCA3Q99618 NEFHP1-201ENST00000412845 2629 ntBASIC16.5■□□□□ 0.23
CDCA3Q99618 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDCA3Q99618 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA3Q99618 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA3Q99618 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDCA3Q99618 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.5■□□□□ 0.23
CDCA3Q99618 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CDCA3Q99618 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.5■□□□□ 0.23
CDCA3Q99618 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDCA3Q99618 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA3Q99618 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.5■□□□□ 0.23
CDCA3Q99618 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 AC105020.1-201ENST00000435356 2205 ntBASIC16.5■□□□□ 0.23
CDCA3Q99618 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.5■□□□□ 0.23
CDCA3Q99618 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDCA3Q99618 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CDCA3Q99618 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA3Q99618 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA3Q99618 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA3Q99618 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms