Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL13Q99616 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 PCDHA1-201ENST00000378133 2726 ntBASIC13.49□□□□□ -0.25
CCL13Q99616 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL13Q99616 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL13Q99616 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 AC026691.1-201ENST00000602502 2017 ntBASIC13.49□□□□□ -0.25
CCL13Q99616 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL13Q99616 AP003680.1-201ENST00000598970 3660 ntBASIC13.49□□□□□ -0.25
CCL13Q99616 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL13Q99616 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL13Q99616 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CCL13Q99616 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CCL13Q99616 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CCL13Q99616 FAM86GP-201ENST00000448322 971 ntBASIC13.48□□□□□ -0.25
CCL13Q99616 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.48□□□□□ -0.25
CCL13Q99616 AL139010.1-201ENST00000454878 894 ntBASIC13.48□□□□□ -0.25
CCL13Q99616 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.48□□□□□ -0.25
CCL13Q99616 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL13Q99616 AC106028.4-201ENST00000614509 607 ntBASIC13.48□□□□□ -0.25
CCL13Q99616 AC007967.4-201ENST00000614700 386 ntBASIC13.48□□□□□ -0.25
CCL13Q99616 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL13Q99616 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL13Q99616 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.48□□□□□ -0.25
CCL13Q99616 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 AC063926.3-201ENST00000624734 5658 ntBASIC13.48□□□□□ -0.25
CCL13Q99616 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL13Q99616 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL13Q99616 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL13Q99616 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL13Q99616 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL13Q99616 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL13Q99616 AC018695.7-201ENST00000624587 2492 ntBASIC13.47□□□□□ -0.25
CCL13Q99616 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CCL13Q99616 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL13Q99616 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL13Q99616 PMS2P2-201ENST00000425039 1128 ntBASIC13.47□□□□□ -0.25
CCL13Q99616 AL645939.2-201ENST00000427340 991 ntBASIC13.47□□□□□ -0.25
CCL13Q99616 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL13Q99616 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL13Q99616 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.47□□□□□ -0.25
CCL13Q99616 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms