Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.34□□□□□ -0.27
S1PR3Q99500 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 WASH6P-202ENST00000359512 1437 ntBASIC13.34□□□□□ -0.27
S1PR3Q99500 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 AC093724.1-201ENST00000448659 1027 ntBASIC13.34□□□□□ -0.27
S1PR3Q99500 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.34□□□□□ -0.27
S1PR3Q99500 AC074386.1-202ENST00000463561 864 ntBASIC13.34□□□□□ -0.27
S1PR3Q99500 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 AC112191.1-201ENST00000523689 701 ntBASIC13.34□□□□□ -0.27
S1PR3Q99500 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 PDPK2P-202ENST00000562415 1191 ntBASIC13.34□□□□□ -0.27
S1PR3Q99500 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.34□□□□□ -0.27
S1PR3Q99500 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 AL513190.1-201ENST00000621254 727 ntBASIC13.34□□□□□ -0.27
S1PR3Q99500 AC092865.6-201ENST00000642101 219 ntBASIC13.34□□□□□ -0.27
S1PR3Q99500 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
S1PR3Q99500 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.34□□□□□ -0.27
S1PR3Q99500 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
S1PR3Q99500 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.34□□□□□ -0.27
S1PR3Q99500 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S1PR3Q99500 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.33□□□□□ -0.27
S1PR3Q99500 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.33□□□□□ -0.27
S1PR3Q99500 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
S1PR3Q99500 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.33□□□□□ -0.27
S1PR3Q99500 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
S1PR3Q99500 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
S1PR3Q99500 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
S1PR3Q99500 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.33□□□□□ -0.28
S1PR3Q99500 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.33□□□□□ -0.28
S1PR3Q99500 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
S1PR3Q99500 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 PRAL-201ENST00000624952 3286 ntBASIC13.33□□□□□ -0.28
S1PR3Q99500 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
S1PR3Q99500 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.33□□□□□ -0.28
S1PR3Q99500 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.33□□□□□ -0.28
S1PR3Q99500 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 AC023274.1-201ENST00000418278 595 ntBASIC13.33□□□□□ -0.28
S1PR3Q99500 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.33□□□□□ -0.28
S1PR3Q99500 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
S1PR3Q99500 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.33□□□□□ -0.28
S1PR3Q99500 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 PGAM5P1-201ENST00000518923 814 ntBASIC13.33□□□□□ -0.28
S1PR3Q99500 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.33□□□□□ -0.28
S1PR3Q99500 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.33□□□□□ -0.28
S1PR3Q99500 AC002347.1-201ENST00000569543 541 ntBASIC13.33□□□□□ -0.28
S1PR3Q99500 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.33□□□□□ -0.28
S1PR3Q99500 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 AC016027.1-202ENST00000607927 1699 ntBASIC13.33□□□□□ -0.28
S1PR3Q99500 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.33□□□□□ -0.28
S1PR3Q99500 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.33□□□□□ -0.28
S1PR3Q99500 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
S1PR3Q99500 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms