Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AL359881.2-201ENST00000602973 570 ntBASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK5RAP2Q96SN8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 KRT90P-201ENST00000549264 1064 ntBASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 AC093813.1-201ENST00000605066 256 ntBASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 COX11-210ENST00000639671 696 ntBASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.58■□□□□ 0.57
CDK5RAP2Q96SN8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 C1QBPP1-201ENST00000400117 770 ntBASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 CSF2RBP1-201ENST00000447905 391 ntBASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 BNIP3P42-201ENST00000454982 569 ntBASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 BNIP3P29-201ENST00000598302 571 ntBASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 AC011447.5-201ENST00000616168 564 ntBASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 AL645728.2-202ENST00000641679 227 ntBASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK5RAP2Q96SN8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDK5RAP2Q96SN8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 AC093433.1-201ENST00000458048 571 ntBASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP2Q96SN8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms