Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H4Q96RI1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H4Q96RI1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H4Q96RI1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.21■□□□□ 0.02
NR1H4Q96RI1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.21■□□□□ 0.02
NR1H4Q96RI1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H4Q96RI1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H4Q96RI1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.21■□□□□ 0.02
NR1H4Q96RI1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
NR1H4Q96RI1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NR1H4Q96RI1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 ATP5G1P1-201ENST00000448724 379 ntBASIC15.2■□□□□ 0.02
NR1H4Q96RI1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 AC034232.1-201ENST00000506026 1064 ntBASIC15.2■□□□□ 0.02
NR1H4Q96RI1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NR1H4Q96RI1 AL928921.2-201ENST00000641325 2442 ntBASIC15.19■□□□□ 0.02
NR1H4Q96RI1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 SLC22A20-204ENST00000530038 1673 ntBASIC15.19■□□□□ 0.02
NR1H4Q96RI1 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 AC126365.1-201ENST00000578585 1514 ntBASIC15.19■□□□□ 0.02
NR1H4Q96RI1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
NR1H4Q96RI1 KRT8P44-201ENST00000441609 1350 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms