Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM47Q96LD4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AL391256.1-201ENST00000443260 1855 ntBASIC18.78■□□□□ 0.6
TRIM47Q96LD4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 MEP1AP4-201ENST00000423244 1087 ntBASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AC007389.4-201ENST00000454674 793 ntBASIC18.78■□□□□ 0.6
TRIM47Q96LD4 CROCCP4-201ENST00000457096 498 ntBASIC18.78■□□□□ 0.6
TRIM47Q96LD4 SERBP1P3-201ENST00000459980 809 ntBASIC18.78■□□□□ 0.6
TRIM47Q96LD4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AL033527.5-202ENST00000641632 1098 ntBASIC18.78■□□□□ 0.6
TRIM47Q96LD4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM47Q96LD4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 ANKRD19P-201ENST00000338192 862 ntBASIC18.77■□□□□ 0.6
TRIM47Q96LD4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 BNIP3P42-201ENST00000454982 569 ntBASIC18.77■□□□□ 0.6
TRIM47Q96LD4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 BNIP3P29-201ENST00000598302 571 ntBASIC18.77■□□□□ 0.6
TRIM47Q96LD4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 AC011447.5-201ENST00000616168 564 ntBASIC18.77■□□□□ 0.6
TRIM47Q96LD4 AL109936.8-201ENST00000641772 604 ntBASIC18.77■□□□□ 0.6
TRIM47Q96LD4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM47Q96LD4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
TRIM47Q96LD4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TRIM47Q96LD4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
TRIM47Q96LD4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM47Q96LD4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM47Q96LD4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
TRIM47Q96LD4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM47Q96LD4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
TRIM47Q96LD4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM47Q96LD4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM47Q96LD4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms