Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 AL589702.1-201ENST00000641229 1509 ntBASIC18.69■□□□□ 0.58
PGBD1Q96JS3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 RFPL4AP1-201ENST00000530883 850 ntBASIC18.68■□□□□ 0.58
PGBD1Q96JS3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 AP001059.3-201ENST00000619053 235 ntBASIC18.68■□□□□ 0.58
PGBD1Q96JS3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PGBD1Q96JS3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 AL645939.2-201ENST00000427340 991 ntBASIC18.67■□□□□ 0.58
PGBD1Q96JS3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 RNA5SP410-201ENST00000516285 106 ntBASIC18.67■□□□□ 0.58
PGBD1Q96JS3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 MIR4453-201ENST00000584019 89 ntBASIC18.67■□□□□ 0.58
PGBD1Q96JS3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PGBD1Q96JS3 AP003680.1-201ENST00000598970 3660 ntBASIC18.67■□□□□ 0.58
PGBD1Q96JS3 AC023824.1-201ENST00000562945 2975 ntBASIC18.66■□□□□ 0.58
PGBD1Q96JS3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.66■□□□□ 0.58
PGBD1Q96JS3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 AC098859.1-201ENST00000502915 1238 ntBASIC18.66■□□□□ 0.58
PGBD1Q96JS3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 AC069262.1-201ENST00000539058 672 ntBASIC18.66■□□□□ 0.58
PGBD1Q96JS3 AC025678.2-201ENST00000562061 970 ntBASIC18.66■□□□□ 0.58
PGBD1Q96JS3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 AC093512.1-201ENST00000617969 520 ntBASIC18.66■□□□□ 0.58
PGBD1Q96JS3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 265.9 ms