Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 AL450472.2-201ENST00000603663 1156 ntBASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 AC004835.2-201ENST00000603762 682 ntBASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 AC018529.1-201ENST00000613063 361 ntBASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDLIM5Q96HC4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 BX842568.4-201ENST00000421222 227 ntBASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 KRT18P32-201ENST00000424695 1287 ntBASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 AL353705.2-201ENST00000428243 662 ntBASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 AC018892.3-201ENST00000623986 2499 ntBASIC15.67■□□□□ 0.1
PDLIM5Q96HC4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 SSR4P1-203ENST00000599569 2260 ntBASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 SPDYE17-201ENST00000412399 783 ntBASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 BANF1P1-201ENST00000553684 263 ntBASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM5Q96HC4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms