Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 AC020765.3-201ENST00000613051 740 ntBASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 AGAP7P-201ENST00000582299 2062 ntBASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 AGAP14-201ENST00000624701 2060 ntBASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP6Q96FZ7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 AC092329.2-201ENST00000598402 547 ntBASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 C18orf15-201ENST00000623680 2534 ntBASIC16.27■□□□□ 0.2
CHMP6Q96FZ7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.27■□□□□ 0.19
CHMP6Q96FZ7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 AC131009.4-201ENST00000624048 1740 ntBASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 AC005622.1-201ENST00000636801 1703 ntBASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP6Q96FZ7 AC099336.1-202ENST00000602961 463 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms