Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE2Q96FN4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 KRT18P67-201ENST00000432816 1264 ntBASIC14.07□□□□□ -0.16
CPNE2Q96FN4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 FAM197Y8-203ENST00000450145 560 ntBASIC14.07□□□□□ -0.16
CPNE2Q96FN4 AC245100.5-201ENST00000452108 331 ntBASIC14.07□□□□□ -0.16
CPNE2Q96FN4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 MIR4751-201ENST00000578027 74 ntBASIC14.07□□□□□ -0.16
CPNE2Q96FN4 AL365330.1-201ENST00000607459 531 ntBASIC14.07□□□□□ -0.16
CPNE2Q96FN4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 AC069224.1-201ENST00000566372 1715 ntBASIC14.07□□□□□ -0.16
CPNE2Q96FN4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.07□□□□□ -0.16
CPNE2Q96FN4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 AP005117.1-202ENST00000581724 1908 ntBASIC14.06□□□□□ -0.16
CPNE2Q96FN4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE2Q96FN4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms