Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF25Q93038 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFRSF25Q93038 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TNFRSF25Q93038 HCG11-201ENST00000411553 5696 ntBASIC18.15■□□□□ 0.5
TNFRSF25Q93038 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF25Q93038 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF25Q93038 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF25Q93038 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFRSF25Q93038 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TNFRSF25Q93038 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TNFRSF25Q93038 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TNFRSF25Q93038 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 Z97205.2-201ENST00000564697 1639 ntBASIC18.14■□□□□ 0.49
TNFRSF25Q93038 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.14■□□□□ 0.49
TNFRSF25Q93038 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 AL645939.2-201ENST00000427340 991 ntBASIC18.14■□□□□ 0.49
TNFRSF25Q93038 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
TNFRSF25Q93038 AC090616.6-203ENST00000579186 1945 ntBASIC18.13■□□□□ 0.49
TNFRSF25Q93038 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 AL590560.3-201ENST00000623350 461 ntBASIC18.13■□□□□ 0.49
TNFRSF25Q93038 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFRSF25Q93038 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF25Q93038 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms