Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.24□□□□□ -0.13
AP3S1Q92572 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S1Q92572 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S1Q92572 AC007686.3-201ENST00000619017 3487 ntBASIC14.24□□□□□ -0.13
AP3S1Q92572 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 SIGLEC16-201ENST00000599858 1437 ntBASIC14.24□□□□□ -0.13
AP3S1Q92572 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S1Q92572 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AP3S1Q92572 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.23□□□□□ -0.13
AP3S1Q92572 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
AP3S1Q92572 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.23□□□□□ -0.13
AP3S1Q92572 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 PRORSD1P-201ENST00000295112 541 ntBASIC14.23□□□□□ -0.13
AP3S1Q92572 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.23□□□□□ -0.13
AP3S1Q92572 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.23□□□□□ -0.13
AP3S1Q92572 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.23□□□□□ -0.13
AP3S1Q92572 IGHV3-41-201ENST00000613121 348 ntBASIC14.23□□□□□ -0.13
AP3S1Q92572 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.23□□□□□ -0.13
AP3S1Q92572 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.23□□□□□ -0.13
AP3S1Q92572 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
AP3S1Q92572 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
AP3S1Q92572 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP3S1Q92572 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP3S1Q92572 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.22□□□□□ -0.13
AP3S1Q92572 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
AP3S1Q92572 AC005912.2-201ENST00000619492 2400 ntBASIC14.22□□□□□ -0.13
AP3S1Q92572 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AP3S1Q92572 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
AP3S1Q92572 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
AP3S1Q92572 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.22□□□□□ -0.13
AP3S1Q92572 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.22□□□□□ -0.13
AP3S1Q92572 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.22□□□□□ -0.13
AP3S1Q92572 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.22□□□□□ -0.13
AP3S1Q92572 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
AP3S1Q92572 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
AP3S1Q92572 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.22□□□□□ -0.13
AP3S1Q92572 AL353135.1-201ENST00000606729 504 ntBASIC14.22□□□□□ -0.13
AP3S1Q92572 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.22□□□□□ -0.13
AP3S1Q92572 FGD5P1-202ENST00000614866 2498 ntBASIC14.22□□□□□ -0.13
AP3S1Q92572 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
AP3S1Q92572 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
AP3S1Q92572 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S1Q92572 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms