Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.11■□□□□ 0.33
SHC3Q92529 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.11■□□□□ 0.33
SHC3Q92529 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SHC3Q92529 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC3Q92529 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC3Q92529 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHC3Q92529 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC3Q92529 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC3Q92529 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SHC3Q92529 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC3Q92529 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC3Q92529 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC3Q92529 AC004967.1-201ENST00000453589 447 ntBASIC17.1■□□□□ 0.33
SHC3Q92529 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SHC3Q92529 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHC3Q92529 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.1■□□□□ 0.33
SHC3Q92529 AL450472.2-201ENST00000603663 1156 ntBASIC17.1■□□□□ 0.33
SHC3Q92529 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC3Q92529 AL133215.2-201ENST00000609242 977 ntBASIC17.1■□□□□ 0.33
SHC3Q92529 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC3Q92529 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC3Q92529 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC3Q92529 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SHC3Q92529 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SHC3Q92529 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC3Q92529 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
SHC3Q92529 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC3Q92529 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SHC3Q92529 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC3Q92529 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC3Q92529 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC3Q92529 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC3Q92529 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC3Q92529 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHC3Q92529 KRT18P13-201ENST00000400056 1290 ntBASIC17.09■□□□□ 0.33
SHC3Q92529 SPDYE17-201ENST00000412399 783 ntBASIC17.09■□□□□ 0.33
SHC3Q92529 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHC3Q92529 PHKG1P2-201ENST00000457537 863 ntBASIC17.09■□□□□ 0.33
SHC3Q92529 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC3Q92529 AL512356.2-201ENST00000546955 174 ntBASIC17.09■□□□□ 0.33
SHC3Q92529 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC3Q92529 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC3Q92529 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHC3Q92529 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC3Q92529 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
SHC3Q92529 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHC3Q92529 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHC3Q92529 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.09■□□□□ 0.33
SHC3Q92529 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC3Q92529 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
SHC3Q92529 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SHC3Q92529 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.09■□□□□ 0.33
SHC3Q92529 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHC3Q92529 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHC3Q92529 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHC3Q92529 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SHC3Q92529 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHC3Q92529 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SHC3Q92529 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHC3Q92529 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHC3Q92529 AC105250.1-201ENST00000509378 2057 ntBASIC17.08■□□□□ 0.33
SHC3Q92529 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SHC3Q92529 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.08■□□□□ 0.33
SHC3Q92529 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SHC3Q92529 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHC3Q92529 AC022532.1-201ENST00000624563 1728 ntBASIC17.08■□□□□ 0.32
SHC3Q92529 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHC3Q92529 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms