Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 AC140658.5-201ENST00000438532 169 ntBASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 AC009947.1-201ENST00000444350 727 ntBASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 UNC93B6-202ENST00000528242 690 ntBASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 C18orf15-201ENST00000623680 2534 ntBASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 AC009090.5-201ENST00000624886 2285 ntBASIC16.14■□□□□ 0.17
SLC44A1Q8WWI5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 WASH6P-202ENST00000359512 1437 ntBASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 AC098831.1-202ENST00000438821 336 ntBASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 AL049840.3-201ENST00000602669 611 ntBASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 MIR7706-201ENST00000613747 67 ntBASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SLC44A1Q8WWI5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 AC004870.1-201ENST00000315132 882 ntBASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 PRYP6-201ENST00000514804 343 ntBASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms