Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 AC107890.1-201ENST00000422478 521 ntBASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 AL079307.3-201ENST00000556114 283 ntBASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 AC105021.1-202ENST00000570572 669 ntBASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SHROOM3Q8TF72 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 FAM207CP-201ENST00000443486 507 ntBASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 AL512361.1-201ENST00000554200 418 ntBASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 AC010336.2-201ENST00000564226 506 ntBASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 AL450472.2-201ENST00000603663 1156 ntBASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 RN7SL828P-201ENST00000607615 303 ntBASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 TEX28P1-201ENST00000613479 1221 ntBASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 TEX28P2-201ENST00000617764 1221 ntBASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 AL590560.3-201ENST00000623350 461 ntBASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 HYMAI-201ENST00000635591 3347 ntBASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.33■□□□□ 0.2
SHROOM3Q8TF72 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 AC055876.3-201ENST00000431496 288 ntBASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 AL359881.2-201ENST00000602973 570 ntBASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 AC138649.4-201ENST00000612222 287 ntBASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
SHROOM3Q8TF72 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms