Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 AC104306.2-201ENST00000451877 341 ntBASIC19.25■□□□□ 0.67
SNED1Q8TER0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 AP006547.1-201ENST00000563435 692 ntBASIC19.25■□□□□ 0.67
SNED1Q8TER0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 AL450472.2-201ENST00000603663 1156 ntBASIC19.25■□□□□ 0.67
SNED1Q8TER0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.25■□□□□ 0.67
SNED1Q8TER0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNED1Q8TER0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 C2orf27AP3-201ENST00000434123 579 ntBASIC19.24■□□□□ 0.67
SNED1Q8TER0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 RPSAP36-202ENST00000494591 1261 ntBASIC19.24■□□□□ 0.67
SNED1Q8TER0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 AC093813.1-201ENST00000605066 256 ntBASIC19.24■□□□□ 0.67
SNED1Q8TER0 AL022328.3-201ENST00000607943 679 ntBASIC19.24■□□□□ 0.67
SNED1Q8TER0 AL354718.3-201ENST00000616414 581 ntBASIC19.24■□□□□ 0.67
SNED1Q8TER0 AC138951.2-201ENST00000623455 1161 ntBASIC19.24■□□□□ 0.67
SNED1Q8TER0 CR382287.1-201ENST00000623954 586 ntBASIC19.24■□□□□ 0.67
SNED1Q8TER0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.24■□□□□ 0.67
SNED1Q8TER0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNED1Q8TER0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 MIR663B-201ENST00000408361 115 ntBASIC19.23■□□□□ 0.67
SNED1Q8TER0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 BX284668.4-201ENST00000453917 508 ntBASIC19.23■□□□□ 0.67
SNED1Q8TER0 AL590640.2-201ENST00000457038 527 ntBASIC19.23■□□□□ 0.67
SNED1Q8TER0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNED1Q8TER0 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 AP001258.2-201ENST00000529891 490 ntBASIC19.23■□□□□ 0.67
SNED1Q8TER0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.23■□□□□ 0.67
SNED1Q8TER0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms