Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 AC022211.2-201ENST00000585075 2527 ntBASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 KRT8P35-201ENST00000483942 1338 ntBASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 POM121L8P-201ENST00000417732 1281 ntBASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 POM121L9P-203ENST00000441984 1285 ntBASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 HIST2H2BC-201ENST00000498492 580 ntBASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 EEF1DP1-201ENST00000585891 896 ntBASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL27A1Q8IZC6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 BTBD6P1-201ENST00000412176 1267 ntBASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 SCARNA20.5-201ENST00000516991 142 ntBASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 AC097724.1-201ENST00000609581 426 ntBASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL27A1Q8IZC6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.78□□□□□ -0.04
COL27A1Q8IZC6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms