Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 KRT8P44-201ENST00000441609 1350 ntBASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 PCDHA3-202ENST00000532566 4594 ntBASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD2Q8IV50 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 PTENP1-202ENST00000532280 3996 ntBASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 SPDYE13P-201ENST00000445314 798 ntBASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 AC011840.4-201ENST00000578471 627 ntBASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 AL592071.1-201ENST00000611956 408 ntBASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.17□□□□□ -0.14
LYSMD2Q8IV50 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 AL592424.1-201ENST00000563624 1536 ntBASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 AC099521.3-201ENST00000624251 2938 ntBASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 AC027612.1-201ENST00000445234 2395 ntBASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 AL356585.2-201ENST00000625078 2396 ntBASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 TSPY5P-201ENST00000426936 936 ntBASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 AC117947.1-201ENST00000427448 529 ntBASIC14.16□□□□□ -0.14
LYSMD2Q8IV50 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms