Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 CRYGEP-201ENST00000412192 528 ntBASIC14.39□□□□□ -0.11
LRRC28Q86X40 MED15P5-201ENST00000423150 992 ntBASIC14.39□□□□□ -0.11
LRRC28Q86X40 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 AC108073.2-201ENST00000464002 357 ntBASIC14.39□□□□□ -0.11
LRRC28Q86X40 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 AC140113.2-201ENST00000604370 208 ntBASIC14.39□□□□□ -0.11
LRRC28Q86X40 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.39□□□□□ -0.11
LRRC28Q86X40 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRC28Q86X40 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC28Q86X40 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 PI4KAP1-204ENST00000612579 1703 ntBASIC14.38□□□□□ -0.11
LRRC28Q86X40 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 KRT18P3-201ENST00000451602 1288 ntBASIC14.38□□□□□ -0.11
LRRC28Q86X40 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 POLD2P1-201ENST00000511220 997 ntBASIC14.38□□□□□ -0.11
LRRC28Q86X40 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 AC004790.2-201ENST00000623588 572 ntBASIC14.38□□□□□ -0.11
LRRC28Q86X40 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 AC007292.2-201ENST00000593524 1812 ntBASIC14.38□□□□□ -0.11
LRRC28Q86X40 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRRC28Q86X40 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.38□□□□□ -0.11
LRRC28Q86X40 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LRRC28Q86X40 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRRC28Q86X40 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms