Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 ACTG1P4-201ENST00000425123 1122 ntBASIC13.44□□□□□ -0.26
ZNF546Q86UE3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.44□□□□□ -0.26
ZNF546Q86UE3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.44□□□□□ -0.26
ZNF546Q86UE3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF546Q86UE3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 Z83836.1-201ENST00000624605 1642 ntBASIC13.43□□□□□ -0.26
ZNF546Q86UE3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 AC105250.1-201ENST00000509378 2057 ntBASIC13.43□□□□□ -0.26
ZNF546Q86UE3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 C18orf15-201ENST00000623680 2534 ntBASIC13.43□□□□□ -0.26
ZNF546Q86UE3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 GUSBP12-201ENST00000513727 720 ntBASIC13.43□□□□□ -0.26
ZNF546Q86UE3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZNF546Q86UE3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.42□□□□□ -0.26
ZNF546Q86UE3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZNF546Q86UE3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms