Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 AC004461.1-201ENST00000412461 403 ntBASIC16.08■□□□□ 0.16
LDB1Q86U70 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.08■□□□□ 0.16
LDB1Q86U70 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.08■□□□□ 0.16
LDB1Q86U70 AC093520.2-201ENST00000561830 333 ntBASIC16.08■□□□□ 0.16
LDB1Q86U70 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.08■□□□□ 0.16
LDB1Q86U70 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.08■□□□□ 0.16
LDB1Q86U70 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.08■□□□□ 0.16
LDB1Q86U70 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.08■□□□□ 0.16
LDB1Q86U70 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.08■□□□□ 0.16
LDB1Q86U70 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.08■□□□□ 0.16
LDB1Q86U70 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.08■□□□□ 0.16
LDB1Q86U70 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.08■□□□□ 0.16
LDB1Q86U70 AP002414.2-201ENST00000591780 3365 ntBASIC16.08■□□□□ 0.16
LDB1Q86U70 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.08■□□□□ 0.16
LDB1Q86U70 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.08■□□□□ 0.16
LDB1Q86U70 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.08■□□□□ 0.16
LDB1Q86U70 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LDB1Q86U70 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
LDB1Q86U70 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LDB1Q86U70 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LDB1Q86U70 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LDB1Q86U70 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 CICP13-201ENST00000422015 2789 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LDB1Q86U70 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
LDB1Q86U70 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.07■□□□□ 0.16
LDB1Q86U70 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 UPF3AP3-201ENST00000420996 769 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.07■□□□□ 0.16
LDB1Q86U70 FAM58DP-201ENST00000428076 619 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 AC005237.2-201ENST00000434368 219 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 AC245100.5-201ENST00000452108 331 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 YBX1P5-201ENST00000509441 847 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.07■□□□□ 0.16
LDB1Q86U70 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.07■□□□□ 0.16
LDB1Q86U70 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.07■□□□□ 0.16
LDB1Q86U70 MIR3687-2-201ENST00000577708 61 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 MIR3687-1-201ENST00000614492 61 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 AP3S2-216ENST00000617003 1561 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LDB1Q86U70 AC018892.3-201ENST00000623986 2499 ntBASIC16.07■□□□□ 0.16
LDB1Q86U70 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LDB1Q86U70 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LDB1Q86U70 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
LDB1Q86U70 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.06■□□□□ 0.16
LDB1Q86U70 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LDB1Q86U70 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LDB1Q86U70 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
LDB1Q86U70 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
LDB1Q86U70 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LDB1Q86U70 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.06■□□□□ 0.16
LDB1Q86U70 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.06■□□□□ 0.16
LDB1Q86U70 KRT8P23-201ENST00000560090 1207 ntBASIC16.06■□□□□ 0.16
LDB1Q86U70 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms