Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.07
ATG4DQ86TL0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATG4DQ86TL0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATG4DQ86TL0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATG4DQ86TL0 AL136982.4-201ENST00000437689 1740 ntBASIC14.58□□□□□ -0.07
ATG4DQ86TL0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ATG4DQ86TL0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATG4DQ86TL0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 AC011270.2-201ENST00000624293 2550 ntBASIC14.58□□□□□ -0.08
ATG4DQ86TL0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 CYMP-203ENST00000474680 1263 ntBASIC14.58□□□□□ -0.08
ATG4DQ86TL0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.58□□□□□ -0.08
ATG4DQ86TL0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATG4DQ86TL0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.57□□□□□ -0.08
ATG4DQ86TL0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 AL627223.1-201ENST00000416693 442 ntBASIC14.57□□□□□ -0.08
ATG4DQ86TL0 FAM58DP-201ENST00000428076 619 ntBASIC14.57□□□□□ -0.08
ATG4DQ86TL0 AL139010.1-201ENST00000454878 894 ntBASIC14.57□□□□□ -0.08
ATG4DQ86TL0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 AP003680.1-201ENST00000598970 3660 ntBASIC14.57□□□□□ -0.08
ATG4DQ86TL0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATG4DQ86TL0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.56□□□□□ -0.08
ATG4DQ86TL0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms