Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 AC000095.1-201ENST00000603208 874 ntBASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 ECM1P1-201ENST00000604092 1279 ntBASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13BQ7Z7G8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 EIF4HP1-201ENST00000453115 687 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CFL1-214ENST00000534769 758 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AC120045.2-201ENST00000567334 178 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AL133499.1-201ENST00000596207 608 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 YBX1P6-201ENST00000442962 1002 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 Z93015.1-201ENST00000451718 390 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 LINC01144-201ENST00000626198 1710 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 PRKXP1-201ENST00000561423 1122 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AC093813.1-201ENST00000605066 256 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 POM121L10P-201ENST00000436994 1285 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 MIR4741-201ENST00000579822 90 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AF254983.2-201ENST00000612331 135 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AP001505.2-201ENST00000616815 443 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 AC138951.2-201ENST00000623455 1161 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 CYP2AB1P-202ENST00000454440 1456 ntBASIC9.72□□□□□ -0.85
VPS13BQ7Z7G8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 AC134312.5-201ENST00000568031 1313 ntBASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 BNIP3P1-202ENST00000550043 1585 ntBASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC9.71□□□□□ -0.85
VPS13BQ7Z7G8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms