Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 C2orf27AP3-201ENST00000434123 579 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 FTLP1-201ENST00000449155 526 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AC044849.1-201ENST00000519737 1188 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AC145423.3-201ENST00000615987 467 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AL354718.3-201ENST00000616414 581 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 CR382287.1-201ENST00000623954 586 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AL451050.2-201ENST00000606967 682 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AC138649.2-201ENST00000615886 705 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 CDK7-214ENST00000626796 358 ntTSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AC006453.4-201ENST00000636949 1252 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AC105020.1-201ENST00000435356 2205 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 GGT3P-204ENST00000453783 1664 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 HLA-A-202ENST00000376806 1854 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 BAATP1-201ENST00000412284 1225 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 AC008894.3-201ENST00000624324 3103 ntBASIC10.97□□□□□ -0.65
CSMD3Q7Z407 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CSMD3Q7Z407 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CSMD3Q7Z407 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms