Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.61□□□□□ -0.07
SHFQ7M4L6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.61□□□□□ -0.07
SHFQ7M4L6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 AC008677.1-201ENST00000519230 1561 ntBASIC14.6□□□□□ -0.07
SHFQ7M4L6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 AF186996.4-201ENST00000467186 377 ntBASIC14.6□□□□□ -0.07
SHFQ7M4L6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.6□□□□□ -0.07
SHFQ7M4L6 AL160237.2-201ENST00000556165 472 ntBASIC14.6□□□□□ -0.07
SHFQ7M4L6 MIR4515-201ENST00000584082 81 ntBASIC14.6□□□□□ -0.07
SHFQ7M4L6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 CLEC4GP1-201ENST00000596555 870 ntBASIC14.6□□□□□ -0.07
SHFQ7M4L6 AC021097.1-201ENST00000607902 574 ntBASIC14.6□□□□□ -0.07
SHFQ7M4L6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 AL109954.1-202ENST00000564051 2148 ntBASIC14.6□□□□□ -0.07
SHFQ7M4L6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.6□□□□□ -0.07
SHFQ7M4L6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHFQ7M4L6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 FAM197Y8-203ENST00000450145 560 ntBASIC14.59□□□□□ -0.07
SHFQ7M4L6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHFQ7M4L6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.59□□□□□ -0.07
SHFQ7M4L6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms