Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC149Q6ZUS6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 ANKRD19P-201ENST00000338192 862 ntBASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 RN7SL399P-201ENST00000471648 279 ntBASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 AC233724.13-201ENST00000598383 410 ntBASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 LINC01115-203ENST00000606068 577 ntBASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 UBALD1-205ENST00000590891 2641 ntBASIC16.81■□□□□ 0.28
CCDC149Q6ZUS6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 AC018665.1-201ENST00000622927 1362 ntBASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.8■□□□□ 0.28
CCDC149Q6ZUS6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms