Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 POU5F1P6-201ENST00000466990 990 ntBASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 AC105021.1-202ENST00000570572 669 ntBASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 AC024267.1-201ENST00000582320 895 ntBASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 REXO1L8P-201ENST00000604378 1897 ntBASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 LINC02228-204ENST00000642115 2962 ntBASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.79■□□□□ 0.28
RFWD3Q6PCD5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 AC011467.4-201ENST00000594891 528 ntBASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 RN7SL828P-201ENST00000607615 303 ntBASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 SPDYE12P-201ENST00000618416 771 ntBASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD3Q6PCD5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD3Q6PCD5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms