Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 AC027307.3-201ENST00000594262 1100 ntBASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H3F3CQ6NXT2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AL691432.1-201ENST00000596308 1422 ntBASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AC004987.2-201ENST00000395959 1148 ntBASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AC044860.1-202ENST00000559481 777 ntBASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 AL662799.1-202ENST00000614205 422 ntBASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.87□□□□□ -0.03
H3F3CQ6NXT2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
H3F3CQ6NXT2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms