Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDC42BPAQ5VT25 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 APOA2-204ENST00000464492 530 ntTSL 3 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC23.78■■□□□ 1.4
CDC42BPAQ5VT25 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 KLF2P2-201ENST00000416807 1039 ntBASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDC42BPAQ5VT25 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 SUN1-204ENST00000403868 978 ntTSL 2 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 HOMER2P2-201ENST00000451621 847 ntBASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 AC011477.6-201ENST00000604980 1927 ntBASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 AC005332.8-201ENST00000622750 2735 ntBASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 PGGT1BP2-201ENST00000398621 1028 ntBASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 EIF3FP3-201ENST00000434851 1086 ntBASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 SCARNA20.5-201ENST00000516991 142 ntBASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDC42BPAQ5VT25 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 MFF-204ENST00000353339 2186 ntTSL 5 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 AL354989.2-201ENST00000435838 1540 ntBASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 AC073413.1-201ENST00000603927 732 ntBASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC23.75■■□□□ 1.39
CDC42BPAQ5VT25 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
CDC42BPAQ5VT25 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms