Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 AP003680.1-201ENST00000598970 3660 ntBASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SH2D4BQ5SQS7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 AC005622.1-201ENST00000636801 1703 ntBASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 AKR1C7P-201ENST00000305623 895 ntBASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 SAPCD2P3-201ENST00000455031 850 ntBASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SH2D4BQ5SQS7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 CICP4-201ENST00000447359 2812 ntBASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 AL592424.1-201ENST00000563624 1536 ntBASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 AC107918.4-202ENST00000641623 219 ntBASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH2D4BQ5SQS7 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.03■□□□□ 0.16
SH2D4BQ5SQS7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SH2D4BQ5SQS7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
SH2D4BQ5SQS7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.03■□□□□ 0.16
SH2D4BQ5SQS7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.03■□□□□ 0.16
SH2D4BQ5SQS7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SH2D4BQ5SQS7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms