Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.71■□□□□ 0.1
SGO1Q5FBB7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.71■□□□□ 0.1
SGO1Q5FBB7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SGO1Q5FBB7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SGO1Q5FBB7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SGO1Q5FBB7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.7■□□□□ 0.1
SGO1Q5FBB7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 MED15P5-201ENST00000423150 992 ntBASIC15.7■□□□□ 0.1
SGO1Q5FBB7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 RNA5SP416-201ENST00000516838 111 ntBASIC15.7■□□□□ 0.1
SGO1Q5FBB7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGO1Q5FBB7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 KRT18P3-201ENST00000451602 1288 ntBASIC15.69■□□□□ 0.1
SGO1Q5FBB7 PRYP6-201ENST00000514804 343 ntBASIC15.69■□□□□ 0.1
SGO1Q5FBB7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 PDPK2P-202ENST00000562415 1191 ntBASIC15.69■□□□□ 0.1
SGO1Q5FBB7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 AP002472.1-201ENST00000577490 586 ntBASIC15.69■□□□□ 0.1
SGO1Q5FBB7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 AC140113.2-201ENST00000604370 208 ntBASIC15.69■□□□□ 0.1
SGO1Q5FBB7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SGO1Q5FBB7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms