Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 AC254562.1-201ENST00000417586 456 ntBASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 KRT18P34-201ENST00000488218 1270 ntBASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 AC069335.1-201ENST00000489972 472 ntBASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
KHDC1Q4VXA5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KHDC1Q4VXA5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 CNN2P11-201ENST00000429351 262 ntBASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 RN7SL589P-201ENST00000481268 310 ntBASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 AP000344.2-201ENST00000512987 629 ntBASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 SNX18-202ENST00000343017 3140 ntBASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KHDC1Q4VXA5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KHDC1Q4VXA5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms