Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 TTTY23B-201ENST00000442790 549 ntBASIC19.09■□□□□ 0.65
PDS5AQ29RF7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 RPL13AP25-201ENST00000484130 612 ntBASIC19.09■□□□□ 0.65
PDS5AQ29RF7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 AC124283.3-201ENST00000570869 594 ntBASIC19.09■□□□□ 0.65
PDS5AQ29RF7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 AL033527.5-201ENST00000641382 801 ntBASIC19.09■□□□□ 0.65
PDS5AQ29RF7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.09■□□□□ 0.65
PDS5AQ29RF7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 AL121723.1-201ENST00000445194 1519 ntBASIC19.08■□□□□ 0.65
PDS5AQ29RF7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 AL133267.1-201ENST00000398220 340 ntBASIC19.08■□□□□ 0.65
PDS5AQ29RF7 ARSEP1-201ENST00000420443 635 ntBASIC19.08■□□□□ 0.65
PDS5AQ29RF7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 MIR4313-201ENST00000580760 101 ntBASIC19.08■□□□□ 0.65
PDS5AQ29RF7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 AC015936.2-201ENST00000593177 259 ntBASIC19.08■□□□□ 0.65
PDS5AQ29RF7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.08■□□□□ 0.65
PDS5AQ29RF7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDS5AQ29RF7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDS5AQ29RF7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDS5AQ29RF7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.08■□□□□ 0.64
PDS5AQ29RF7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDS5AQ29RF7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.08■□□□□ 0.64
PDS5AQ29RF7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDS5AQ29RF7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDS5AQ29RF7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDS5AQ29RF7 AC018892.3-201ENST00000623986 2499 ntBASIC19.08■□□□□ 0.64
PDS5AQ29RF7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 AL162726.2-201ENST00000438986 1017 ntBASIC19.07■□□□□ 0.64
PDS5AQ29RF7 GPR53P-205ENST00000457298 1084 ntBASIC19.07■□□□□ 0.64
PDS5AQ29RF7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDS5AQ29RF7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms