Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CDH17Q12864 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH17Q12864 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDH17Q12864 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 ELL2P1-201ENST00000413990 1906 ntBASIC16.26■□□□□ 0.19
CDH17Q12864 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.26■□□□□ 0.19
CDH17Q12864 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH17Q12864 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH17Q12864 DNAJB3-201ENST00000446806 729 ntBASIC16.26■□□□□ 0.19
CDH17Q12864 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH17Q12864 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.26■□□□□ 0.19
CDH17Q12864 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH17Q12864 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CDH17Q12864 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH17Q12864 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH17Q12864 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH17Q12864 AC084121.4-201ENST00000641598 221 ntBASIC16.26■□□□□ 0.19
CDH17Q12864 AF228730.8-201ENST00000642140 221 ntBASIC16.26■□□□□ 0.19
CDH17Q12864 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH17Q12864 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH17Q12864 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH17Q12864 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 UXT-AS1-201ENST00000590504 1525 ntBASIC16.25■□□□□ 0.19
CDH17Q12864 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH17Q12864 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH17Q12864 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH17Q12864 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
CDH17Q12864 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH17Q12864 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH17Q12864 AL592309.1-201ENST00000443127 649 ntBASIC16.25■□□□□ 0.19
CDH17Q12864 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH17Q12864 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH17Q12864 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH17Q12864 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 AC005829.1-201ENST00000570002 483 ntBASIC16.25■□□□□ 0.19
CDH17Q12864 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH17Q12864 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDH17Q12864 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH17Q12864 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH17Q12864 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH17Q12864 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH17Q12864 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH17Q12864 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CDH17Q12864 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.24■□□□□ 0.19
CDH17Q12864 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH17Q12864 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH17Q12864 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH17Q12864 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDH17Q12864 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH17Q12864 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH17Q12864 CEND1P1-201ENST00000451006 455 ntBASIC16.24■□□□□ 0.19
CDH17Q12864 AC069335.1-201ENST00000489972 472 ntBASIC16.24■□□□□ 0.19
CDH17Q12864 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDH17Q12864 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH17Q12864 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH17Q12864 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDH17Q12864 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH17Q12864 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms