Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.66■□□□□ 0.42
UBXN1Q04323 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 AC002347.1-201ENST00000569543 541 ntBASIC17.66■□□□□ 0.42
UBXN1Q04323 AP001005.1-201ENST00000571755 1248 ntBASIC17.66■□□□□ 0.42
UBXN1Q04323 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.66■□□□□ 0.42
UBXN1Q04323 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.66■□□□□ 0.42
UBXN1Q04323 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.66■□□□□ 0.42
UBXN1Q04323 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
UBXN1Q04323 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
UBXN1Q04323 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
UBXN1Q04323 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBXN1Q04323 AC134407.2-201ENST00000625089 1978 ntBASIC17.66■□□□□ 0.42
UBXN1Q04323 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
UBXN1Q04323 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.66■□□□□ 0.42
UBXN1Q04323 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UBXN1Q04323 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.65■□□□□ 0.42
UBXN1Q04323 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UBXN1Q04323 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.65■□□□□ 0.42
UBXN1Q04323 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UBXN1Q04323 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UBXN1Q04323 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.65■□□□□ 0.42
UBXN1Q04323 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.65■□□□□ 0.42
UBXN1Q04323 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.65■□□□□ 0.42
UBXN1Q04323 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.65■□□□□ 0.42
UBXN1Q04323 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.65■□□□□ 0.42
UBXN1Q04323 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.65■□□□□ 0.42
UBXN1Q04323 AC004877.2-201ENST00000623941 599 ntBASIC17.65■□□□□ 0.42
UBXN1Q04323 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
UBXN1Q04323 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.65■□□□□ 0.42
UBXN1Q04323 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 PMS2P7-201ENST00000506558 1336 ntBASIC17.65■□□□□ 0.42
UBXN1Q04323 BCAR1-209ENST00000546196 1340 ntBASIC17.65■□□□□ 0.42
UBXN1Q04323 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBXN1Q04323 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBXN1Q04323 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
UBXN1Q04323 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBXN1Q04323 AP001282.1-201ENST00000531301 1499 ntBASIC17.64■□□□□ 0.41
UBXN1Q04323 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
UBXN1Q04323 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.64■□□□□ 0.41
UBXN1Q04323 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.64■□□□□ 0.41
UBXN1Q04323 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBXN1Q04323 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
UBXN1Q04323 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.64■□□□□ 0.41
UBXN1Q04323 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.64■□□□□ 0.41
UBXN1Q04323 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.64■□□□□ 0.41
UBXN1Q04323 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.64■□□□□ 0.41
UBXN1Q04323 AC079776.4-201ENST00000511039 504 ntBASIC17.64■□□□□ 0.41
UBXN1Q04323 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
UBXN1Q04323 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.64■□□□□ 0.41
UBXN1Q04323 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.64■□□□□ 0.41
UBXN1Q04323 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.64■□□□□ 0.41
UBXN1Q04323 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.64■□□□□ 0.41
UBXN1Q04323 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBXN1Q04323 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.64■□□□□ 0.41
UBXN1Q04323 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.64■□□□□ 0.41
UBXN1Q04323 TNRC18P2-201ENST00000417666 2714 ntBASIC17.64■□□□□ 0.41
UBXN1Q04323 AC087481.3-201ENST00000602886 1894 ntBASIC17.64■□□□□ 0.41
UBXN1Q04323 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.64■□□□□ 0.41
UBXN1Q04323 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.64■□□□□ 0.41
UBXN1Q04323 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.64■□□□□ 0.41
UBXN1Q04323 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 AC006058.4-201ENST00000624016 1670 ntBASIC17.64■□□□□ 0.41
UBXN1Q04323 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.64■□□□□ 0.41
UBXN1Q04323 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBXN1Q04323 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms