Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 U82695.1-201ENST00000635752 1889 ntBASIC11.44□□□□□ -0.58
RPL39P62891 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.43□□□□□ -0.58
RPL39P62891 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.43□□□□□ -0.58
RPL39P62891 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.43□□□□□ -0.58
RPL39P62891 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.43□□□□□ -0.58
RPL39P62891 AP000867.3-201ENST00000524675 377 ntBASIC11.43□□□□□ -0.58
RPL39P62891 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.43□□□□□ -0.58
RPL39P62891 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.43□□□□□ -0.58
RPL39P62891 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.43□□□□□ -0.58
RPL39P62891 AC099336.1-202ENST00000602961 463 ntBASIC11.43□□□□□ -0.58
RPL39P62891 AP001269.4-201ENST00000609611 512 ntBASIC11.43□□□□□ -0.58
RPL39P62891 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.43□□□□□ -0.58
RPL39P62891 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.43□□□□□ -0.58
RPL39P62891 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.43□□□□□ -0.58
RPL39P62891 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 AC092127.1-201ENST00000567093 3455 ntBASIC11.43□□□□□ -0.58
RPL39P62891 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RPL39P62891 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.43□□□□□ -0.58
RPL39P62891 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.42□□□□□ -0.58
RPL39P62891 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.42□□□□□ -0.58
RPL39P62891 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
RPL39P62891 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.42□□□□□ -0.58
RPL39P62891 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.42□□□□□ -0.58
RPL39P62891 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.42□□□□□ -0.58
RPL39P62891 PTCHD3P3-201ENST00000403073 906 ntBASIC11.42□□□□□ -0.58
RPL39P62891 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms