Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC008741.2-201ENST00000612792 3115 ntBASIC18.56■□□□□ 0.56
HERVK_113P62684 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.56■□□□□ 0.56
HERVK_113P62684 AL662844.4-201ENST00000606367 2838 ntBASIC18.56■□□□□ 0.56
HERVK_113P62684 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
HERVK_113P62684 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.56■□□□□ 0.56
HERVK_113P62684 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.56■□□□□ 0.56
HERVK_113P62684 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.56■□□□□ 0.56
HERVK_113P62684 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.56■□□□□ 0.56
HERVK_113P62684 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.56■□□□□ 0.56
HERVK_113P62684 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.56■□□□□ 0.56
HERVK_113P62684 AC015936.2-201ENST00000593177 259 ntBASIC18.56■□□□□ 0.56
HERVK_113P62684 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.56■□□□□ 0.56
HERVK_113P62684 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HERVK_113P62684 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HERVK_113P62684 MIR6775-201ENST00000617557 69 ntBASIC18.56■□□□□ 0.56
HERVK_113P62684 AL391005.1-201ENST00000623953 2435 ntBASIC18.56■□□□□ 0.56
HERVK_113P62684 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.56■□□□□ 0.56
HERVK_113P62684 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.56■□□□□ 0.56
HERVK_113P62684 GGT3P-204ENST00000453783 1664 ntBASIC18.56■□□□□ 0.56
HERVK_113P62684 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HERVK_113P62684 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HERVK_113P62684 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HERVK_113P62684 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
HERVK_113P62684 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
HERVK_113P62684 AL162727.3-201ENST00000635661 2787 ntBASIC18.55■□□□□ 0.56
HERVK_113P62684 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.55■□□□□ 0.56
HERVK_113P62684 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.55■□□□□ 0.56
HERVK_113P62684 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
HERVK_113P62684 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.55■□□□□ 0.56
HERVK_113P62684 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERVK_113P62684 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HERVK_113P62684 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HERVK_113P62684 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERVK_113P62684 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERVK_113P62684 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.55■□□□□ 0.56
HERVK_113P62684 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.55■□□□□ 0.56
HERVK_113P62684 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.55■□□□□ 0.56
HERVK_113P62684 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.55■□□□□ 0.56
HERVK_113P62684 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HERVK_113P62684 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.55■□□□□ 0.56
HERVK_113P62684 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HERVK_113P62684 AP005482.1-201ENST00000563722 1273 ntBASIC18.55■□□□□ 0.56
HERVK_113P62684 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.55■□□□□ 0.56
HERVK_113P62684 AL033527.4-201ENST00000641026 673 ntBASIC18.55■□□□□ 0.56
HERVK_113P62684 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERVK_113P62684 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.55■□□□□ 0.56
HERVK_113P62684 Z97205.2-201ENST00000564697 1639 ntBASIC18.55■□□□□ 0.56
HERVK_113P62684 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HERVK_113P62684 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
HERVK_113P62684 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HERVK_113P62684 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERVK_113P62684 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.55■□□□□ 0.56
HERVK_113P62684 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HERVK_113P62684 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.55■□□□□ 0.56
HERVK_113P62684 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HERVK_113P62684 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HERVK_113P62684 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HERVK_113P62684 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HERVK_113P62684 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERVK_113P62684 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.54■□□□□ 0.56
HERVK_113P62684 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HERVK_113P62684 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.54■□□□□ 0.56
HERVK_113P62684 KRT223P-202ENST00000449164 1292 ntBASIC18.54■□□□□ 0.56
HERVK_113P62684 CROCCP4-201ENST00000457096 498 ntBASIC18.54■□□□□ 0.56
HERVK_113P62684 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.54■□□□□ 0.56
HERVK_113P62684 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.54■□□□□ 0.56
HERVK_113P62684 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.54■□□□□ 0.56
HERVK_113P62684 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.54■□□□□ 0.56
HERVK_113P62684 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.54■□□□□ 0.56
HERVK_113P62684 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.54■□□□□ 0.56
HERVK_113P62684 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
HERVK_113P62684 AC010319.3-201ENST00000597028 470 ntBASIC18.54■□□□□ 0.56
HERVK_113P62684 LINC01115-203ENST00000606068 577 ntBASIC18.54■□□□□ 0.56
HERVK_113P62684 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HERVK_113P62684 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.54■□□□□ 0.56
HERVK_113P62684 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.54■□□□□ 0.56
HERVK_113P62684 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERVK_113P62684 OR6D1P-202ENST00000641007 5290 ntBASIC18.54■□□□□ 0.56
HERVK_113P62684 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms