Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
AP3S2P59780 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
AP3S2P59780 HAUS4P1-201ENST00000406739 1145 ntBASIC13.88□□□□□ -0.19
AP3S2P59780 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.88□□□□□ -0.19
AP3S2P59780 LIN28AP1-201ENST00000429574 405 ntBASIC13.88□□□□□ -0.19
AP3S2P59780 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 VENTXP5-201ENST00000523979 775 ntBASIC13.88□□□□□ -0.19
AP3S2P59780 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S2P59780 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AP3S2P59780 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.88□□□□□ -0.19
AP3S2P59780 IGHV3-41-201ENST00000613121 348 ntBASIC13.88□□□□□ -0.19
AP3S2P59780 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S2P59780 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
AP3S2P59780 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
AP3S2P59780 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.88□□□□□ -0.19
AP3S2P59780 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.88□□□□□ -0.19
AP3S2P59780 SIGLEC16-201ENST00000599858 1437 ntBASIC13.88□□□□□ -0.19
AP3S2P59780 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP3S2P59780 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.88□□□□□ -0.19
AP3S2P59780 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.87□□□□□ -0.19
AP3S2P59780 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S2P59780 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
AP3S2P59780 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.87□□□□□ -0.19
AP3S2P59780 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S2P59780 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
AP3S2P59780 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.87□□□□□ -0.19
AP3S2P59780 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.87□□□□□ -0.19
AP3S2P59780 AL845331.1-201ENST00000424978 1190 ntBASIC13.87□□□□□ -0.19
AP3S2P59780 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
AP3S2P59780 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.87□□□□□ -0.19
AP3S2P59780 ATP5G1P1-201ENST00000448724 379 ntBASIC13.87□□□□□ -0.19
AP3S2P59780 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S2P59780 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.87□□□□□ -0.19
AP3S2P59780 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 LINC00552-201ENST00000625151 2579 ntBASIC13.87□□□□□ -0.19
AP3S2P59780 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S2P59780 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S2P59780 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
AP3S2P59780 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.87□□□□□ -0.19
AP3S2P59780 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S2P59780 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
AP3S2P59780 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
AP3S2P59780 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S2P59780 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S2P59780 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S2P59780 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
AP3S2P59780 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
AP3S2P59780 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms