Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.81■□□□□ 0.6
RHBDL3P58872 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDL3P58872 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RHBDL3P58872 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RHBDL3P58872 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.8■□□□□ 0.6
RHBDL3P58872 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 RPS2P32-201ENST00000439199 892 ntBASIC18.8■□□□□ 0.6
RHBDL3P58872 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.8■□□□□ 0.6
RHBDL3P58872 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 VDAC1P7-201ENST00000462417 847 ntBASIC18.8■□□□□ 0.6
RHBDL3P58872 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 SLC25A47P1-201ENST00000531577 414 ntBASIC18.8■□□□□ 0.6
RHBDL3P58872 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 AC120045.2-201ENST00000567334 178 ntBASIC18.8■□□□□ 0.6
RHBDL3P58872 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 MIR4313-201ENST00000580760 101 ntBASIC18.8■□□□□ 0.6
RHBDL3P58872 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.8■□□□□ 0.6
RHBDL3P58872 AC233724.13-201ENST00000598383 410 ntBASIC18.8■□□□□ 0.6
RHBDL3P58872 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RHBDL3P58872 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDL3P58872 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDL3P58872 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RHBDL3P58872 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RHBDL3P58872 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.79■□□□□ 0.6
RHBDL3P58872 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDL3P58872 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RHBDL3P58872 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.79■□□□□ 0.6
RHBDL3P58872 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RHBDL3P58872 AC011270.2-201ENST00000624293 2550 ntBASIC18.79■□□□□ 0.6
RHBDL3P58872 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RHBDL3P58872 AC134915.1-201ENST00000426461 574 ntBASIC18.79■□□□□ 0.6
RHBDL3P58872 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RHBDL3P58872 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.79■□□□□ 0.6
RHBDL3P58872 CLUHP6-201ENST00000580789 941 ntBASIC18.79■□□□□ 0.6
RHBDL3P58872 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDL3P58872 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDL3P58872 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.79■□□□□ 0.6
RHBDL3P58872 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.79■□□□□ 0.6
RHBDL3P58872 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.79■□□□□ 0.6
RHBDL3P58872 AC018665.1-201ENST00000622927 1362 ntBASIC18.79■□□□□ 0.6
RHBDL3P58872 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.79■□□□□ 0.6
RHBDL3P58872 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDL3P58872 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.78■□□□□ 0.6
RHBDL3P58872 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDL3P58872 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDL3P58872 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms