Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN12P56749 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLDN12P56749 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 MYO15B-237ENST00000642007 4893 ntBASIC14.06□□□□□ -0.16
CLDN12P56749 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN12P56749 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLDN12P56749 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN12P56749 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLDN12P56749 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN12P56749 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN12P56749 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN12P56749 RBM17P3-201ENST00000417687 1192 ntBASIC14.06□□□□□ -0.16
CLDN12P56749 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLDN12P56749 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN12P56749 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.06□□□□□ -0.16
CLDN12P56749 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN12P56749 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN12P56749 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CLDN12P56749 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN12P56749 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN12P56749 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN12P56749 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN12P56749 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN12P56749 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN12P56749 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CLDN12P56749 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN12P56749 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
CLDN12P56749 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN12P56749 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLDN12P56749 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN12P56749 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN12P56749 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN12P56749 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
CLDN12P56749 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN12P56749 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN12P56749 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN12P56749 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN12P56749 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN12P56749 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN12P56749 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN12P56749 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN12P56749 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN12P56749 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN12P56749 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLDN12P56749 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN12P56749 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN12P56749 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN12P56749 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN12P56749 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms