Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.98□□□□□ -0.49
CMC4P56277 AL079307.3-201ENST00000556114 283 ntBASIC11.98□□□□□ -0.49
CMC4P56277 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CMC4P56277 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.98□□□□□ -0.49
CMC4P56277 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.97□□□□□ -0.49
CMC4P56277 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.97□□□□□ -0.49
CMC4P56277 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.97□□□□□ -0.49
CMC4P56277 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CMC4P56277 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 KRT8P37-201ENST00000451609 1420 ntBASIC11.97□□□□□ -0.49
CMC4P56277 AC009053.2-201ENST00000563701 2365 ntBASIC11.97□□□□□ -0.49
CMC4P56277 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CMC4P56277 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CMC4P56277 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CMC4P56277 MIR943-201ENST00000401286 94 ntBASIC11.97□□□□□ -0.49
CMC4P56277 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 IGHV3-42-201ENST00000520410 361 ntBASIC11.97□□□□□ -0.49
CMC4P56277 AC027369.6-201ENST00000525520 931 ntBASIC11.97□□□□□ -0.49
CMC4P56277 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.97□□□□□ -0.49
CMC4P56277 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.97□□□□□ -0.49
CMC4P56277 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.97□□□□□ -0.49
CMC4P56277 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.97□□□□□ -0.49
CMC4P56277 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CMC4P56277 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC11.97□□□□□ -0.49
CMC4P56277 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CMC4P56277 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CMC4P56277 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.96□□□□□ -0.49
CMC4P56277 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.96□□□□□ -0.49
CMC4P56277 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
CMC4P56277 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CMC4P56277 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CMC4P56277 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.96□□□□□ -0.49
CMC4P56277 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CMC4P56277 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CMC4P56277 AL118508.1-201ENST00000613502 2345 ntBASIC11.96□□□□□ -0.49
CMC4P56277 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CMC4P56277 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CMC4P56277 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CMC4P56277 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CMC4P56277 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.96□□□□□ -0.49
CMC4P56277 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CMC4P56277 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms