Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.41■□□□□ 0.54
HMGCS2P54868 CSF2RBP1-201ENST00000447905 391 ntBASIC18.41■□□□□ 0.54
HMGCS2P54868 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.41■□□□□ 0.54
HMGCS2P54868 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.41■□□□□ 0.54
HMGCS2P54868 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGCS2P54868 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.41■□□□□ 0.54
HMGCS2P54868 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HMGCS2P54868 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HMGCS2P54868 MSTO2P-201ENST00000314835 1709 ntBASIC18.4■□□□□ 0.54
HMGCS2P54868 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
HMGCS2P54868 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCS2P54868 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCS2P54868 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HMGCS2P54868 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.4■□□□□ 0.54
HMGCS2P54868 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.4■□□□□ 0.54
HMGCS2P54868 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCS2P54868 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCS2P54868 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.4■□□□□ 0.54
HMGCS2P54868 HNRNPUP1-201ENST00000554987 333 ntBASIC18.4■□□□□ 0.54
HMGCS2P54868 CLUHP6-201ENST00000580789 941 ntBASIC18.4■□□□□ 0.54
HMGCS2P54868 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.4■□□□□ 0.54
HMGCS2P54868 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCS2P54868 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.4■□□□□ 0.54
HMGCS2P54868 GPR182-203ENST00000622922 591 ntBASIC18.4■□□□□ 0.54
HMGCS2P54868 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HMGCS2P54868 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HMGCS2P54868 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HMGCS2P54868 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HMGCS2P54868 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
HMGCS2P54868 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCS2P54868 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCS2P54868 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCS2P54868 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HMGCS2P54868 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HMGCS2P54868 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HMGCS2P54868 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
HMGCS2P54868 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HMGCS2P54868 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCS2P54868 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCS2P54868 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HMGCS2P54868 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HMGCS2P54868 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 HAUS4P1-201ENST00000406739 1145 ntBASIC18.39■□□□□ 0.53
HMGCS2P54868 AC136604.1-201ENST00000418535 575 ntBASIC18.39■□□□□ 0.53
HMGCS2P54868 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 RPL7P3-201ENST00000441388 714 ntBASIC18.39■□□□□ 0.53
HMGCS2P54868 AL355864.2-201ENST00000447420 863 ntBASIC18.39■□□□□ 0.53
HMGCS2P54868 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HMGCS2P54868 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.39■□□□□ 0.53
HMGCS2P54868 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
HMGCS2P54868 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 AL450472.2-201ENST00000603663 1156 ntBASIC18.39■□□□□ 0.53
HMGCS2P54868 AL606495.2-201ENST00000605867 535 ntBASIC18.39■□□□□ 0.53
HMGCS2P54868 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HMGCS2P54868 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
HMGCS2P54868 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
HMGCS2P54868 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
HMGCS2P54868 ME2P1-201ENST00000426028 1970 ntBASIC18.39■□□□□ 0.53
HMGCS2P54868 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS2P54868 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS2P54868 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMGCS2P54868 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS2P54868 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCS2P54868 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS2P54868 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS2P54868 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms