Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 AC023824.1-201ENST00000562945 2975 ntBASIC17.06■□□□□ 0.32
CACNA2D1P54289 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.06■□□□□ 0.32
CACNA2D1P54289 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.06■□□□□ 0.32
CACNA2D1P54289 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 LINC02084-201ENST00000606069 1096 ntBASIC17.06■□□□□ 0.32
CACNA2D1P54289 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 AJ011932.1-201ENST00000621707 465 ntBASIC17.06■□□□□ 0.32
CACNA2D1P54289 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.06■□□□□ 0.32
CACNA2D1P54289 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 AC009407.1-201ENST00000568958 598 ntBASIC17.05■□□□□ 0.32
CACNA2D1P54289 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 MIR4745-201ENST00000577608 62 ntBASIC17.05■□□□□ 0.32
CACNA2D1P54289 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 AC006449.6-201ENST00000612330 2296 ntBASIC17.05■□□□□ 0.32
CACNA2D1P54289 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNA2D1P54289 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CACNA2D1P54289 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 CYP4F24P-201ENST00000586049 1580 ntBASIC17.04■□□□□ 0.32
CACNA2D1P54289 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 AC009477.1-201ENST00000452936 217 ntBASIC17.04■□□□□ 0.32
CACNA2D1P54289 AL139010.1-201ENST00000454878 894 ntBASIC17.04■□□□□ 0.32
CACNA2D1P54289 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D1P54289 AL512361.1-201ENST00000554200 418 ntBASIC17.04■□□□□ 0.32
CACNA2D1P54289 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 AC092364.2-202ENST00000597012 1073 ntBASIC17.04■□□□□ 0.32
CACNA2D1P54289 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.04■□□□□ 0.32
CACNA2D1P54289 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms