Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLTCL1P53675 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC22.56■■□□□ 1.2
CLTCL1P53675 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLTCL1P53675 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLTCL1P53675 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLTCL1P53675 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLTCL1P53675 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLTCL1P53675 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
CLTCL1P53675 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC22.56■■□□□ 1.2
CLTCL1P53675 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC22.56■■□□□ 1.2
CLTCL1P53675 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC22.56■■□□□ 1.2
CLTCL1P53675 C2orf69P2-201ENST00000562032 1123 ntBASIC22.56■■□□□ 1.2
CLTCL1P53675 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLTCL1P53675 LARP4-220ENST00000615080 856 ntTSL 5 BASIC22.56■■□□□ 1.2
CLTCL1P53675 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC22.56■■□□□ 1.2
CLTCL1P53675 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CLTCL1P53675 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLTCL1P53675 AC092364.2-201ENST00000596710 2692 ntBASIC22.55■■□□□ 1.2
CLTCL1P53675 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLTCL1P53675 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLTCL1P53675 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLTCL1P53675 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLTCL1P53675 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CLTCL1P53675 YBX1P6-201ENST00000442962 1002 ntBASIC22.55■■□□□ 1.2
CLTCL1P53675 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLTCL1P53675 RN7SL219P-201ENST00000582872 296 ntBASIC22.55■■□□□ 1.2
CLTCL1P53675 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC22.55■■□□□ 1.2
CLTCL1P53675 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC22.55■■□□□ 1.2
CLTCL1P53675 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLTCL1P53675 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLTCL1P53675 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC22.55■■□□□ 1.2
CLTCL1P53675 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLTCL1P53675 AC020907.1-201ENST00000616460 1350 ntBASIC22.55■■□□□ 1.2
CLTCL1P53675 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLTCL1P53675 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC22.54■■□□□ 1.2
CLTCL1P53675 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC22.54■■□□□ 1.2
CLTCL1P53675 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC22.54■■□□□ 1.2
CLTCL1P53675 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CLTCL1P53675 FAM8A2P-201ENST00000528813 1142 ntBASIC22.54■■□□□ 1.2
CLTCL1P53675 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC22.54■■□□□ 1.2
CLTCL1P53675 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 AC078819.1-201ENST00000547454 765 ntBASIC22.54■■□□□ 1.2
CLTCL1P53675 AC012085.1-201ENST00000548270 765 ntBASIC22.54■■□□□ 1.2
CLTCL1P53675 RN7SL560P-201ENST00000577943 264 ntBASIC22.54■■□□□ 1.2
CLTCL1P53675 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC22.54■■□□□ 1.2
CLTCL1P53675 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC22.54■■□□□ 1.2
CLTCL1P53675 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC22.54■■□□□ 1.2
CLTCL1P53675 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CLTCL1P53675 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC22.54■■□□□ 1.2
CLTCL1P53675 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC22.54■■□□□ 1.2
CLTCL1P53675 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC22.54■■□□□ 1.2
CLTCL1P53675 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLTCL1P53675 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC22.53■■□□□ 1.2
CLTCL1P53675 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC22.53■■□□□ 1.2
CLTCL1P53675 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
CLTCL1P53675 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC22.53■■□□□ 1.2
CLTCL1P53675 AC079316.1-201ENST00000548397 411 ntBASIC22.53■■□□□ 1.2
CLTCL1P53675 EMC4-209ENST00000559421 497 ntTSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC22.53■■□□□ 1.2
CLTCL1P53675 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC22.53■■□□□ 1.2
CLTCL1P53675 AC243960.2-201ENST00000600996 747 ntBASIC22.53■■□□□ 1.2
CLTCL1P53675 AC244093.1-201ENST00000610837 814 ntBASIC22.53■■□□□ 1.2
CLTCL1P53675 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC22.53■■□□□ 1.2
CLTCL1P53675 AC138951.2-201ENST00000623455 1161 ntBASIC22.53■■□□□ 1.2
CLTCL1P53675 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC22.53■■□□□ 1.2
CLTCL1P53675 LOX-206ENST00000639739 1626 ntTSL 5 BASIC22.53■■□□□ 1.2
CLTCL1P53675 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC22.53■■□□□ 1.2
CLTCL1P53675 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC22.53■■□□□ 1.2
CLTCL1P53675 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLTCL1P53675 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms